2016

An Automated Whisker Tracking Tool for the Rat Facial Nerve Injury Paradigm
Benjamin Dorschner and Herbert Süße and Wolfgang Ortmann and Andrey Irintchev and Joachim Denzler and Orlando Guntinas-Lichius.
Journal of Neuroscience Methods. 271: pages 143-148. 2016.
[bibtex] [web] [doi:10.1016/j.jneumeth.2016.07.015] []

Abstract: Background: The two-dimensional videographic analysis of vibrissal movements in behaving rodents has become a standard method to estimate the degree of functional impairment and recovery after facial nerve injuries quantitatively. The main limitation of the method is the time consuming, uneconomic process of manually tracking the vibrissae in video sequences. New method: We developed a novel tool allowing automated detection of untagged vibrissae (two on each side of the snout). To compare the new method with the standard manual tracking approach, we used videos of unrestrained rats with unilateral section and immediate suture of the facial nerve performed two months earlier. Results: Measurement agreement analyses showed that the two methods are equivalent for both normal? high-amplitude vibrissal movements (non-operated side) and low-amplitude whisking (reinnervated side). Spectral analysis revealed a significant deviation in the power spectra on the control and injured side, indicating that bilaterally coordinated whisker movements are not present two months after surgery. Comparison with existing method(s): The novel method yields results equal to those of the manual tracking approach. An advantage of our tool is the possibility to significantly increase sample size without additional labor cost. Conclusions The novel tool can increase the efficacy and spectrum of functional measures used in facial nerve regeneration research.

2015

Automated analysis of confocal laser endomicroscopy images to detect head and neck cancer
Andreas Dittberner and Erik Rodner and Wolfgang Ortmann and Joachim Stadler and Carsten Schmidt and Iver Petersen and Andreas Stallmach and Joachim Denzler and Orlando Guntinas-Lichius.
Head & Neck. 38 (1): 2015.
[bibtex] [web] [doi:10.1002/hed.24253]
Regularized Geometric Hulls for Bio-medical Image Segmentation
Marco Körner and Mahesh Venkata Krishna and Herbert Süße and Wolfgang Ortmann and Joachim Denzler.
Annals of the BMVA. pages 1-12. 2015.
[bibtex] [pdf] []

Abstract: One of the most important and challenging tasks in bio-medical image analysis is the localization, identification, and discrimination of salient objects or structures. While to date human experts are performing these tasks manually at the expense of time and reliability, methods for automation of these processes are evidently called for. This paper outlines a novel technique for geometric clustering of related object evidence called regularized geometric hulls (RGH) and gives three exemplary real-world application scenarios. Several experiments performed on real-world data highlight a set of useful advantages, such as robustness, reliability, as well as efficient runtime behavior.
Novel computer vision algorithm for the reliable analysis of organelle morphology in whole cell 3D images - a pilot study for the quantitative evaluation of mitochondrial fragmentation in amyotrophic lateral sclerosis
Janin Lautenschläger and Christian Lautenschläger and Vedrana Tadic and Herbert Süße and Wolfgang Ortmann and Joachim Denzler and Andreas Stallmach and Otto W. Witte and Julian Grosskreutz.
Mitochondrion. 25 (1): pages 49-59. 2015.
[bibtex] [web] [doi:10.1016/j.mito.2015.10.003]
Analysis and Classification of Microscopy Images with Cell Border Distance Statistics
Erik Rodner and Wolfgang Ortmann and Andreas Dittberner and Joachim Stadler and Carsten Schmidt and Iver Petersen and Andreas Stallmach and Joachim Denzler and Orlando Guntinas-Lichius.
Jahrestagung der Deutschen Gesellschaft für Medizinische Physik (DGMP). 2015.
[bibtex] [pdf]

2014

Regularized Geometric Hulls for Robust Cell Nucleus Segmentation from Microscopy Images
Marco Körner and Mahesh Venkata Krishna and Herbert Süße and Wolfgang Ortmann and Joachim Denzler.
Conference in Medical Image Understanding and Analysis (MIUA). Pages 117-122. 2014.
[bibtex] [pdf]

2013

Oriented Differences of Boxes Operators for Blood Vessel Segmentation and Analysis in Confocal Laser Endomicroscopy Images with minimal User Interaction
Herbert Süße and Wolfgang Ortmann and Christian Lautenschläger and Marco Körner and Carsten Schmidt and Andreas Stallmach and Joachim Denzler.
Annual Conference in Medical Image Understanding and Analysis (MIUA). Pages 155-160. 2013.
[bibtex] [pdf]

2011

A Method for Fast Composing of Images Captured from Deformed Documents by a Quadocular Scanner Setup
Marco Körner and Herbert Süße and Wolfgang Ortmann and Joachim Denzler.
Machine Vision Applications (MVA). Pages 291-294. 2011.
[bibtex] [pdf]

2008

Difference of Boxes Filters Revisited: Shadow Suppression and Efficient Character Segmentation
Erik Rodner and Herbert Süße and Wolfgang Ortmann and Joachim Denzler.
IAPR Workshop on Document Analysis Systems. Pages 263-269. 2008.
[bibtex] [pdf] [presentation] []

Abstract: A robust segmentation is the most important part of an automatic character recognition system (e.g. document pro- cessing, license plate recognition etc.). In our contribution we present an efficient segmentation framework using a pre- processing step for shadow suppression combined with a local thresholding technique. The method is based on a combination of difference of boxes filters and a new ternary segmentation, which are both simple low-level image oper- ations. We also draw parallels to a recently published work on a ganglion cell model and show that our approach is theoret- ically more substantiated as well as more robust and more efficient in practice. Systematic evaluation of noisy input data as well as results on a large dataset of license plate images 1 show the robustness and efficiency of our proposed method. Our results can be applied easily to any optical char- acter recognition system resulting in an impressive gain of robustness against nonlinear illumination.

2006

A Novel Approach to Affine Point Pattern Matching
Herbert Süße and Wolfgang Ortmann and Klaus Voss.
. Pages 434-444. 2006.
[bibtex] [pdf]

2004

Radon, Hough, Acumulacion y el metodo SDR
Klaus Voss and Herbert Süße and Wolfgang Ortmann. 2004.
[bibtex]

2003

Robust Matching of Affinely Transformed Objects
Herbert Süße and Wolfgang Ortmann and Klaus Voss.
International Conference on Image Processing (ICIP). Pages 383-386. 2003.
[bibtex] [pdf]

1999

Bildmatching und Bewegungskompensation von Fundus-Bildern
Wolfgang Ortmann and Thorsten Baumbach.
Bildverarbeitung für die Medizin. Pages 387-391. 1999.
[bibtex]
Shift Detection by Restoration
Herbert Süße and Klaus Voss and Wolfgang Ortmann and Thorsten Baumbach.
International Conference on Computer Analysis of Images and Patterns (CAIP). Pages 33-40. 1999.
[bibtex]
Shift Detection By Restoration
Klaus Voss and Herbert Süße and Wolfgang Ortmann and Thorsten Baumbach.
Pattern Recognition. 32: pages 2067-2068. 1999.
[bibtex]